Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | CY658_02620 | Not Available | Negative | 577216 - 578133 | 33331.0 |
| branched-chain amino acid aminotransferase | CY658_02625 | Not Available | Positive | 578257 - 579075 | 28703.3 |
| hypothetical protein | CY658_02630 | Not Available | Negative | 579151 - 579615 | 17133.4 |
| dna-binding response regulator | CY658_02635 | Not Available | Positive | 579753 - 580472 | 24804.0 |
| hybrid sensor histidine kinase/response regulator | CY658_02640 | Not Available | Positive | 580484 - 582268 | 64904.1 |
| signal recognition particle-docking protein ftsy | CY658_02645 | Not Available | Negative | 582588 - 583544 | 33812.0 |
| peptidase m16 | CY658_02650 | Not Available | Positive | 583982 - 585427 | 51907.9 |
| peptidase m16 | CY658_02655 | Not Available | Positive | 585446 - 586804 | 47935.2 |
| argp/lysg family dna-binding transcriptional regulator | CY658_02660 | Not Available | Negative | 586813 - 587724 | 32343.9 |
| amino acid transporter | CY658_02665 | Not Available | Positive | 587804 - 588439 | 22072.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
