Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobyrinic acid a,c-diamide synthase | CY658_02520 | Not Available | Positive | 561232 - 561852 | 22668.5 |
| maoc family dehydratase | CY658_02525 | Not Available | Positive | 561925 - 562395 | 17311.9 |
| duf4148 domain-containing protein | CY658_02530 | Not Available | Negative | 562421 - 562711 | 10017.9 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | CY658_02535 | Not Available | Negative | 562836 - 563297 | 17073.5 |
| comf family protein | CY658_02540 | Not Available | Negative | 563329 - 564045 | 25638.3 |
| biotin synthase | CY658_02545 | Not Available | Positive | 564068 - 564982 | 34135.9 |
| duf2244 domain-containing protein | CY658_02550 | Not Available | Positive | 565146 - 565622 | 17658.5 |
| cytochrome c oxidase subunit ii | CY658_02555 | Not Available | Positive | 565682 - 566860 | 42832.9 |
| cytochrome c oxidase subunit i | CY658_02560 | Not Available | Positive | 566904 - 568541 | 60792.2 |
| cytochrome c oxidase assembly protein | CY658_02565 | Not Available | Positive | 568739 - 569368 | 23151.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
