Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| twin-arginine translocation pathway signal protein | CY658_02470 | Not Available | Negative | 550099 - 551091 | 33969.9 |
| 3-hydroxyacyl-coa dehydrogenase | CY658_02475 | Not Available | Negative | 551126 - 551890 | 26067.8 |
| feruloyl-coa synthase | CY658_02480 | Not Available | Negative | 551912 - 553765 | 66728.9 |
| enoyl-coa hydratase | CY658_02485 | Not Available | Negative | 553762 - 554535 | 27623.2 |
| 4-hydroxyphenyl-beta-ketoacyl-coa hydrolase | CY658_02490 | Not Available | Positive | 554640 - 555515 | 32860.4 |
| rpir family transcriptional regulator | CY658_02495 | Not Available | Negative | 555519 - 556415 | 31980.4 |
| abc transporter substrate-binding protein | CY658_02500 | Not Available | Positive | 556538 - 557539 | 34784.4 |
| succinylglutamate desuccinylase | CY658_02505 | Not Available | Positive | 557556 - 558518 | 34588.4 |
| glutathione-regulated potassium-efflux system protein kefc | CY658_02510 | Not Available | Negative | 558528 - 560387 | 66978.6 |
| nad(p)h dehydrogenase | CY658_02515 | Not Available | Negative | 560390 - 561139 | 27234.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
