Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidase | CY658_02420 | Not Available | Negative | 540896 - 542308 | 50142.7 |
| gntr family transcriptional regulator | CY658_02425 | Not Available | Negative | 542434 - 543216 | 29028.8 |
| sulfite exporter taue/safe family protein | CY658_02430 | Not Available | Positive | 543392 - 544150 | 27225.6 |
| duf1428 domain-containing protein | CY658_02435 | Not Available | Negative | 544157 - 544519 | 13742.9 |
| mfs transporter | CY658_02440 | Not Available | Negative | 544590 - 546065 | 50251.9 |
| voc family protein | CY658_02445 | Not Available | Negative | 546115 - 546534 | 15052.3 |
| voc family protein | CY658_02450 | Not Available | Negative | 546586 - 547026 | 15386.4 |
| tetr family transcriptional regulator | CY658_02455 | Not Available | Positive | 547153 - 547806 | 22974.6 |
| marr family transcriptional regulator | CY658_02460 | Not Available | Negative | 547823 - 548317 | 17928.6 |
| acyl-coa dehydrogenase | CY658_02465 | Not Available | Negative | 548354 - 550093 | 62664.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
