Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CY658_02370 | Not Available | Positive | 531052 - 532203 | 42554.7 |
| hypothetical protein | CY658_02375 | Not Available | Positive | 532498 - 532998 | 18932.5 |
| rna-splicing ligase rtcb | CY658_02380 | Not Available | Positive | 533035 - 534255 | 44397.4 |
| hypothetical protein | CY658_02385 | Not Available | Positive | 534842 - 535195 | 13174.7 |
| rna 3'-terminal phosphate cyclase | CY658_02390 | Not Available | Positive | 535219 - 536325 | 39009.1 |
| alpha/beta hydrolase | CY658_02395 | Not Available | Negative | 536330 - 536689 | 12406.3 |
| adenylate/guanylate cyclase domain-containing protein | CY658_02400 | Not Available | Negative | 536807 - 538465 | 60150.2 |
| cyclic nucleotide-binding protein | CY658_02405 | Not Available | Positive | 538464 - 539234 | 27749.4 |
| doxx family protein | CY658_02410 | Not Available | Negative | 539236 - 539709 | 15940.0 |
| abc transporter substrate-binding protein | CY658_02415 | Not Available | Negative | 539843 - 540847 | 34904.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
