Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | CY658_02320 | Not Available | Positive | 520455 - 521486 | 38105.3 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | CY658_02325 | Not Available | Positive | 521519 - 522364 | 30020.0 |
| hypothetical protein | CY658_02330 | Not Available | Negative | 522415 - 522885 | 16823.9 |
| hypothetical protein | CY658_02335 | Not Available | Negative | 522973 - 523242 | 9472.45 |
| tonb-dependent receptor | CY658_02340 | Not Available | Positive | 523550 - 525763 | 79915.1 |
| ornithine cyclodeaminase | CY658_02345 | Not Available | Negative | 525797 - 526747 | 33346.7 |
| alpha/beta hydrolase | CY658_02350 | Not Available | Negative | 526744 - 527610 | 31326.2 |
| exonuclease | CY658_02355 | Not Available | Negative | 527607 - 528164 | 20618.5 |
| hypothetical protein | CY658_02360 | Not Available | Negative | 528161 - 528700 | 19365.5 |
| transcriptional regulator | CY658_02365 | Not Available | Negative | 528724 - 530343 | 60167.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
