Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | CY658_02270 | Not Available | Negative | 505334 - 506272 | 33963.1 |
| d-aminoacylase | CY658_02275 | Not Available | Negative | 506315 - 507799 | 53474.2 |
| amino acid deaminase | CY658_02280 | Not Available | Negative | 507820 - 509115 | 46776.0 |
| peptide abc transporter atp-binding protein | CY658_02285 | Not Available | Negative | 509112 - 510089 | 35422.9 |
| dipeptide abc transporter atp-binding protein dppd | CY658_02290 | Not Available | Negative | 510232 - 511269 | 37494.8 |
| peptide abc transporter permease | CY658_02295 | Not Available | Negative | 511269 - 512108 | 30255.3 |
| peptide abc transporter | CY658_02300 | Not Available | Negative | 512112 - 513053 | 33519.0 |
| peptide abc transporter | CY658_02305 | Not Available | Negative | 513063 - 514649 | 57741.6 |
| hypothetical protein | CY658_02310 | Not Available | Positive | 514877 - 519613 | 165860.0 |
| hypothetical protein | CY658_02315 | Not Available | Positive | 519665 - 520417 | 27722.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
