Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase a24 | CY658_02170 | Not Available | Negative | 483143 - 483646 | 17943.3 |
| flp family type ivb pilin | CY658_02175 | Not Available | Negative | 483662 - 483841 | 6074.6 |
| hypothetical protein | CY658_02180 | Not Available | Negative | 484254 - 485753 | 54230.6 |
| duf4440 domain-containing protein | CY658_02185 | Not Available | Negative | 485720 - 486898 | 41048.7 |
| receptor | CY658_02190 | Not Available | Positive | 487104 - 488108 | 34315.9 |
| iclr family transcriptional regulator | CY658_02195 | Not Available | Negative | 488143 - 488928 | 28234.5 |
| 3-oxoadipate coa-transferase | CY658_02200 | Not Available | Positive | 489066 - 489767 | 24600.7 |
| 3-oxoadipate coa-transferase | CY658_02205 | Not Available | Positive | 489764 - 490411 | 22776.6 |
| 3-oxoadipyl-coa thiolase | CY658_02210 | Not Available | Positive | 490441 - 491646 | 41789.4 |
| hypothetical protein | CY658_02215 | Not Available | Positive | 491646 - 492623 | 33188.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
