Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CY658_02115 | Not Available | Negative | 471902 - 473662 | 61451.1 |
| pilus assembly protein tadg | CY658_02120 | Not Available | Negative | 473676 - 474161 | 17190.8 |
| pilus assembly protein | CY658_02125 | Not Available | Negative | 474158 - 474643 | 17626.6 |
| hypothetical protein | CY658_02135 | Not Available | Negative | 475100 - 475960 | 30408.0 |
| secretion system protein | CY658_02140 | Not Available | Negative | 476032 - 476997 | 35658.4 |
| secretion system protein | CY658_02145 | Not Available | Negative | 476994 - 477719 | 26047.7 |
| pilus assembly protein cpaf | CY658_02150 | Not Available | Negative | 477991 - 479307 | 48777.5 |
| histidine kinase | CY658_02155 | Not Available | Negative | 479311 - 480594 | 45974.1 |
| hypothetical protein | CY658_02160 | Not Available | Negative | 480636 - 482009 | 47956.4 |
| flp pilus assembly protein cpab | CY658_02165 | Not Available | Negative | 482058 - 483062 | 34901.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
