Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | CY658_02065 | Not Available | Positive | 455399 - 456358 | 33555.0 |
| duf1841 domain-containing protein | CY658_02070 | Not Available | Negative | 456366 - 456800 | 16293.1 |
| hypothetical protein | CY658_02075 | Not Available | Positive | 457296 - 461363 | 124491.0 |
| peptidoglycan-associated lipoprotein | CY658_02080 | Not Available | Positive | 461456 - 461953 | 18408.9 |
| mur ligase | CY658_02085 | Not Available | Positive | 462065 - 465169 | 114119.0 |
| hypothetical protein | CY658_02090 | Not Available | Positive | 465166 - 465459 | 10834.0 |
| abc transporter | CY658_02095 | Not Available | Positive | 465551 - 467380 | 65290.5 |
| hlyd family type i secretion periplasmic adaptor subunit | CY658_02100 | Not Available | Positive | 467443 - 468759 | 47855.3 |
| transporter | CY658_02105 | Not Available | Positive | 468756 - 470327 | 56569.3 |
| sigma-54-dependent fis family transcriptional regulator | CY658_02110 | Not Available | Negative | 470460 - 471872 | 51771.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
