Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2892 domain-containing protein | CY658_02010 | Not Available | Positive | 444765 - 444977 | 7422.54 |
| rna polymerase subunit sigma-24 | CY658_02015 | Not Available | Positive | 444981 - 445502 | 19285.3 |
| dihydroorotase | CY658_02020 | Not Available | Positive | 445540 - 446571 | 37903.3 |
| nyn domain-containing protein | CY658_02025 | Not Available | Positive | 446571 - 447389 | 29561.0 |
| nyn domain-containing protein | CY658_02030 | Not Available | Positive | 447448 - 448257 | 28602.8 |
| duf3025 domain-containing protein | CY658_02035 | Not Available | Positive | 448233 - 449030 | 28671.2 |
| hypothetical protein | CY658_02040 | Not Available | Positive | 449124 - 451574 | 87532.3 |
| protease htpx | CY658_02045 | Not Available | Positive | 451604 - 452476 | 30665.0 |
| protocatechuate 3,4-dioxygenase subunit alpha | CY658_02055 | Not Available | Negative | 453914 - 454525 | 22180.0 |
| protocatechuate 3,4-dioxygenase subunit beta | CY658_02060 | Not Available | Negative | 454537 - 455259 | 27121.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
