Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | CY658_01960 | Not Available | Negative | 435522 - 435902 | 14121.9 |
| amidase | CY658_01965 | Not Available | Negative | 435960 - 437138 | 40877.9 |
| dipeptide abc transporter atp-binding protein dppd | CY658_01970 | Not Available | Negative | 437165 - 438154 | 35504.4 |
| dipeptide/oligopeptide/nickel abc transporter atp-binding protein | CY658_01975 | Not Available | Negative | 438190 - 439239 | 37910.8 |
| abc transporter permease | CY658_01980 | Not Available | Negative | 439244 - 440143 | 31643.4 |
| abc transporter permease | CY658_01985 | Not Available | Negative | 440167 - 441120 | 34696.3 |
| abc transporter substrate-binding protein | CY658_01990 | Not Available | Negative | 441156 - 442817 | 60183.2 |
| hypothetical protein | CY658_01995 | Not Available | Negative | 443079 - 443321 | 8569.36 |
| (2fe-2s)-binding protein | CY658_02000 | Not Available | Negative | 443369 - 443707 | 11534.8 |
| hypothetical protein | CY658_02005 | Not Available | Positive | 443762 - 444616 | 30675.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
