Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate binding protein | CY658_01910 | Not Available | Negative | 422479 - 423477 | 35463.1 |
| acyl-coa synthetase | CY658_01915 | Not Available | Negative | 423531 - 425483 | 68406.9 |
| abc transporter substrate-binding protein | CY658_01920 | Not Available | Negative | 425539 - 426537 | 35095.6 |
| coa transferase | CY658_01925 | Not Available | Negative | 426582 - 427790 | 43278.1 |
| enoyl-coa hydratase | CY658_01930 | Not Available | Negative | 427853 - 428668 | 28500.2 |
| pimeloyl-coa dehydrogenase small subunit | CY658_01935 | Not Available | Negative | 428665 - 429807 | 40167.9 |
| pimeloyl-coa dehydrogenase large subunit | CY658_01940 | Not Available | Negative | 429820 - 431028 | 44220.9 |
| acetyl-coa c-acyltransferase | CY658_01945 | Not Available | Negative | 431047 - 432237 | 42009.5 |
| 3-hydroxyacyl-coa dehydrogenase | CY658_01950 | Not Available | Negative | 432270 - 434405 | 75627.3 |
| lysr family transcriptional regulator | CY658_01955 | Not Available | Positive | 434561 - 435475 | 34210.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
