Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription elongation factor greab | CY658_01855 | Not Available | Positive | 412320 - 412802 | 17736.3 |
| gntr family transcriptional regulator | CY658_01860 | Not Available | Negative | 412882 - 414348 | 53801.6 |
| hypothetical protein | CY658_01865 | Not Available | Positive | 414731 - 414967 | 8733.95 |
| hypothetical protein | CY658_01870 | Not Available | Positive | 415563 - 416126 | 19590.5 |
| duf1993 domain-containing protein | CY658_01875 | Not Available | Negative | 416348 - 416812 | 17172.7 |
| hypothetical protein | CY658_01880 | Not Available | Positive | 417054 - 417323 | 9689.35 |
| hypothetical protein | CY658_01890 | Not Available | Positive | 417929 - 419035 | 41030.1 |
| nitronate monooxygenase | CY658_01895 | Not Available | Negative | 419759 - 420730 | 34858.1 |
| electron transfer flavoprotein subunit alpha | CY658_01900 | Not Available | Negative | 420746 - 421678 | 31301.2 |
| electron transporter rnfb | CY658_01905 | Not Available | Negative | 421692 - 422441 | 26833.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
