Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-coa dehydrogenase | CY658_01755 | Not Available | Positive | 390137 - 392560 | 86183.2 |
| acetyl-coa c-acyltransferase | CY658_01760 | Not Available | Positive | 392572 - 393774 | 41634.3 |
| acyl-coa thioesterase | CY658_01765 | Not Available | Positive | 393926 - 394762 | 30302.8 |
| glucose 1-dehydrogenase | CY658_01770 | Not Available | Positive | 394768 - 395514 | 27004.3 |
| disulfide bond formation protein dsba | CY658_01775 | Not Available | Positive | 395565 - 396158 | 21316.6 |
| enoyl-coa hydratase | CY658_01780 | Not Available | Positive | 396361 - 397125 | 27041.0 |
| abc transporter substrate-binding protein | CY658_01785 | Not Available | Positive | 397321 - 398439 | 40184.9 |
| acyl-coa thioesterase | CY658_01790 | Not Available | Negative | 398450 - 398893 | 15780.0 |
| metal abc transporter permease | CY658_01795 | Not Available | Positive | 398936 - 400771 | 67886.6 |
| hydroxyacid dehydrogenase | CY658_01800 | Not Available | Positive | 400815 - 401753 | 33207.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
