Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | CY658_01705 | Not Available | Negative | 380850 - 381857 | 36798.9 |
| gntr family transcriptional regulator | CY658_01710 | Not Available | Negative | 381905 - 382612 | 25943.0 |
| nad(p)-dependent oxidoreductase | CY658_01715 | Not Available | Positive | 382787 - 383521 | 25333.7 |
| 3-oxoacyl-acp reductase | CY658_01720 | Not Available | Positive | 383518 - 384273 | 26202.4 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | CY658_01725 | Not Available | Positive | 384308 - 385156 | 30487.4 |
| lysr family transcriptional regulator | CY658_01730 | Not Available | Negative | 385146 - 386033 | 32379.3 |
| oxidoreductase | CY658_01735 | Not Available | Positive | 386143 - 386901 | 26253.4 |
| tetr/acrr family transcriptional regulator | CY658_01740 | Not Available | Positive | 387041 - 387745 | 25085.1 |
| acyl-coa dehydrogenase | CY658_01745 | Not Available | Positive | 387821 - 389617 | 64982.4 |
| duf2147 domain-containing protein | CY658_01750 | Not Available | Positive | 389663 - 390097 | 15692.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
