Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | CY658_01655 | Not Available | Negative | 369368 - 371395 | 75100.3 |
| glycosyl transferase | CY658_01660 | Not Available | Negative | 371481 - 372239 | 28601.6 |
| glycosyl transferase | CY658_01665 | Not Available | Positive | 372285 - 373376 | 40149.5 |
| acetylglutamate kinase | CY658_01670 | Not Available | Positive | 373441 - 374334 | 31491.3 |
| nucleoid occlusion factor slma | CY658_01675 | Not Available | Positive | 374422 - 375072 | 23516.2 |
| eama family transporter | CY658_01680 | Not Available | Positive | 375280 - 376164 | 29820.2 |
| malate/lactate/ureidoglycolate dehydrogenase | CY658_01685 | Not Available | Negative | 376161 - 377219 | 36675.9 |
| galactonate dehydratase | CY658_01690 | Not Available | Negative | 377291 - 378829 | 54087.3 |
| abc transporter permease | CY658_01695 | Not Available | Negative | 378832 - 380229 | 50012.0 |
| trap transporter permease dctq | CY658_01700 | Not Available | Negative | 380281 - 380838 | 21180.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
