Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide biosynthesis protein rfbh | CY658_01605 | Not Available | Positive | 359928 - 361259 | 48924.9 |
| epimerase | CY658_01610 | Not Available | Positive | 361210 - 362304 | 38303.8 |
| transketolase | CY658_01615 | Not Available | Positive | 362301 - 363113 | 29176.8 |
| transketolase | CY658_01620 | Not Available | Positive | 363110 - 364027 | 32128.9 |
| gtra family protein | CY658_01625 | Not Available | Positive | 364029 - 364394 | 12811.2 |
| glycosyltransferase | CY658_01630 | Not Available | Positive | 364391 - 365326 | 35401.1 |
| sugar abc transporter atp-binding protein | CY658_01635 | Not Available | Negative | 365379 - 366083 | 25083.6 |
| abc transporter permease | CY658_01640 | Not Available | Negative | 366086 - 366889 | 30481.8 |
| glycosyltransferase family 2 protein | CY658_01645 | Not Available | Positive | 367248 - 368252 | 37653.4 |
| glycosyltransferase family 2 protein | CY658_01650 | Not Available | Positive | 368263 - 369327 | 40371.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
