Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose 3,5-epimerase | CY658_01505 | Not Available | Positive | 339504 - 340052 | 20175.8 |
| hypothetical protein | CY658_01510 | Not Available | Positive | 340235 - 341863 | 60471.0 |
| hypothetical protein | CY658_01515 | Not Available | Positive | 341883 - 342323 | 16692.9 |
| erythromycin biosynthesis sensory transduction protein eryc1 | CY658_01520 | Not Available | Positive | 342324 - 343424 | 39173.0 |
| hypothetical protein | CY658_01525 | Not Available | Positive | 343387 - 344382 | 36154.4 |
| hypothetical protein | CY658_01530 | Not Available | Positive | 344527 - 346287 | 65191.9 |
| aminotransferase | CY658_01535 | Not Available | Positive | 346309 - 347415 | 40804.3 |
| hypothetical protein | CY658_01540 | Not Available | Positive | 347444 - 348145 | 26665.4 |
| glycosylase | CY658_01545 | Not Available | Positive | 348148 - 349110 | 36230.8 |
| hypothetical protein | CY658_01550 | Not Available | Positive | 349121 - 350077 | 35759.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
