Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactoylglutathione lyase | CY658_01455 | Not Available | Negative | 329147 - 329554 | 14248.8 |
| eama family transporter | CY658_01460 | Not Available | Negative | 329566 - 330516 | 33200.4 |
| lysine transporter lyse | CY658_01465 | Not Available | Negative | 330513 - 331112 | 21168.7 |
| plp-dependent aminotransferase family protein | CY658_01470 | Not Available | Positive | 331234 - 332655 | 52074.8 |
| hypothetical protein | CY658_01475 | Not Available | Positive | 332720 - 333508 | 27621.6 |
| hypothetical protein | CY658_01480 | Not Available | Positive | 333558 - 334838 | 44475.8 |
| amino acid dehydrogenase | CY658_01485 | Not Available | Negative | 334858 - 336159 | 47519.9 |
| dtdp-glucose 4,6-dehydratase | CY658_01490 | Not Available | Positive | 336611 - 337690 | 40001.0 |
| dtdp-4-dehydrorhamnose reductase | CY658_01495 | Not Available | Positive | 337687 - 338577 | 32043.1 |
| glucose-1-phosphate thymidylyltransferase | CY658_01500 | Not Available | Positive | 338620 - 339507 | 32245.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
