Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| creatininase | CY658_01405 | Not Available | Positive | 320711 - 321538 | 28730.6 |
| hypothetical protein | CY658_01410 | Not Available | Negative | 321817 - 322788 | 34329.7 |
| lysine transporter lyse | CY658_01415 | Not Available | Negative | 322809 - 323441 | 22426.3 |
| voc family protein | CY658_01420 | Not Available | Negative | 323443 - 324138 | 24479.3 |
| phenazine biosynthesis protein phzf | CY658_01425 | Not Available | Negative | 324152 - 325093 | 33119.7 |
| glutathione s-transferase | CY658_01430 | Not Available | Negative | 325090 - 325731 | 24184.8 |
| phzf family phenazine biosynthesis protein | CY658_01435 | Not Available | Negative | 325769 - 326602 | 28428.9 |
| lysine transporter lyse | CY658_01440 | Not Available | Negative | 326617 - 327255 | 22265.9 |
| arac family transcriptional regulator | CY658_01445 | Not Available | Negative | 327272 - 327895 | 21649.2 |
| 2-aminoadipate aminotransferase | CY658_01450 | Not Available | Negative | 327910 - 329103 | 42432.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
