Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | Positive | 297508 - 297620 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 297741 - 300632 | Not Available |
| glycosyl transferase family 51 | CY658_01320 | Not Available | Negative | 296637 - 299642 | 110096.0 |
| thioredoxin family protein | CY658_01325 | Not Available | Negative | 299862 - 300428 | 19789.5 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 301231 - 302768 | Not Available |
| protein-disulfide reductase | CY658_01330 | Not Available | Negative | 300679 - 302841 | 74791.4 |
| ala-trna(pro) hydrolase | CY658_01335 | Not Available | Negative | 302959 - 303732 | 27215.5 |
| sorbosone dehydrogenase | CY658_01340 | Not Available | Positive | 303863 - 305221 | 47456.6 |
| laci family transcriptional regulator | CY658_01345 | Not Available | Negative | 305247 - 306287 | 36540.9 |
| nucleobase:cation symporter | CY658_01350 | Not Available | Positive | 306435 - 307811 | 47204.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
