Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdenum cofactor biosynthesis protein f | CY658_01270 | Not Available | Positive | 286634 - 287440 | 29536.5 |
| duf4440 domain-containing protein | CY658_01275 | Not Available | Positive | 287467 - 287859 | 14543.3 |
| aldehyde dehydrogenase | CY658_01280 | Not Available | Positive | 287906 - 289408 | 52723.1 |
| branched-chain amino acid abc transporter substrate-binding protein | CY658_01285 | Not Available | Positive | 289451 - 290716 | 44405.1 |
| branched-chain amino acid abc transporter permease | CY658_01290 | Not Available | Positive | 290729 - 291598 | 30224.9 |
| branched-chain amino acid abc transporter permease | CY658_01295 | Not Available | Positive | 291595 - 292665 | 36880.0 |
| branched-chain amino acid abc transporter atp-binding protein | CY658_01300 | Not Available | Positive | 292662 - 293369 | 24895.4 |
| abc transporter atp-binding protein | CY658_01305 | Not Available | Positive | 293377 - 294084 | 24613.4 |
| arac family transcriptional regulator | CY658_01310 | Not Available | Negative | 294110 - 295090 | 36828.9 |
| mfs transporter | CY658_01315 | Not Available | Negative | 295232 - 296539 | 47027.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
