Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CY658_01220 | Not Available | Negative | 273675 - 274124 | 15644.3 |
| atp-dependent dna helicase rep | CY658_01225 | Not Available | Negative | 274130 - 276226 | 78032.1 |
| transporter | CY658_01230 | Not Available | Positive | 276377 - 277396 | 34658.7 |
| hypothetical protein | CY658_01235 | Not Available | Negative | 277409 - 278053 | 22613.5 |
| hypothetical protein | CY658_01240 | Not Available | Positive | 278355 - 278564 | 7733.57 |
| peptidase | CY658_01245 | Not Available | Positive | 278725 - 280308 | 56155.8 |
| primosomal protein n' | CY658_01250 | Not Available | Negative | 280327 - 282402 | 74557.7 |
| uroporphyrinogen decarboxylase | CY658_01255 | Not Available | Negative | 282889 - 283998 | 39672.6 |
| gmc family oxidoreductase | CY658_01260 | Not Available | Positive | 284142 - 285746 | 56750.9 |
| 3-oxoacyl-acp reductase | CY658_01265 | Not Available | Positive | 285835 - 286623 | 26752.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
