Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative xre family transcriptional regulator | CY658_04865 | Not Available | Positive | 1022534 - 1023106 | 20731.0 |
| Pilin | CY658_04870 | Not Available | Positive | 1023325 - 1023825 | 16446.9 |
| Putative phage repressor | CY658_04875 | Not Available | Negative | 1023881 - 1024639 | 27449.7 |
| hypothetical protein | CY658_04880 | Not Available | Positive | 1024718 - 1024987 | 9322.33 |
| hypothetical protein | CY658_04885 | Not Available | Positive | 1025598 - 1026026 | 15602.7 |
| hypothetical protein | CY658_04890 | Not Available | Positive | 1026023 - 1026331 | 11236.0 |
| hypothetical protein | CY658_04895 | Not Available | Positive | 1026328 - 1026702 | 13692.4 |
| hypothetical protein | CY658_04900 | Not Available | Positive | 1026699 - 1026935 | 8552.44 |
| hypothetical protein | CY658_04905 | Not Available | Positive | 1026935 - 1027216 | 10334.5 |
| Replication protein | CY658_04910 | Not Available | Positive | 1027216 - 1028046 | 30107.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
