Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cusa/czca family heavy metal efflux rnd transporter | CY658_01060 | Not Available | Negative | 236013 - 239138 | 112784.0 |
| efflux rnd transporter periplasmic adaptor subunit | CY658_01065 | Not Available | Negative | 239156 - 240373 | 42351.5 |
| tolc family protein | CY658_01070 | Not Available | Negative | 240370 - 241689 | 47746.8 |
| adenylate cyclase | CY658_01075 | Not Available | Negative | 242223 - 242552 | 10973.0 |
| phosphoethanolamine transferase | CY658_01080 | Not Available | Negative | 242586 - 244310 | 62281.1 |
| hypothetical protein | CY658_01085 | Not Available | Negative | 244613 - 244849 | 9302.17 |
| hypothetical protein | CY658_01090 | Not Available | Negative | 245121 - 246059 | 34317.5 |
| porin | CY658_01095 | Not Available | Negative | 246222 - 247445 | 42317.4 |
| transcriptional regulator | CY658_01100 | Not Available | Positive | 248849 - 249193 | 12774.5 |
| dna-binding response regulator | CY658_01105 | Not Available | Positive | 249590 - 250273 | 25308.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
