Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CY658_00925 | Not Available | Positive | 206310 - 206540 | 8118.84 |
| hypothetical protein | CY658_00930 | Not Available | Negative | 207962 - 208648 | 24876.6 |
| alkaline phosphatase | CY658_00935 | Not Available | Negative | 208669 - 210189 | 52902.8 |
| alkaline phosphatase | CY658_00940 | Not Available | Negative | 210234 - 211706 | 51573.9 |
| porin | CY658_00950 | Not Available | Positive | 212992 - 214236 | 43339.8 |
| heavy metal translocating p-type atpase | CY658_00955 | Not Available | Positive | 215047 - 217689 | 92358.8 |
| hypothetical protein | CY658_00960 | Not Available | Negative | 217745 - 217918 | 6462.07 |
| hypothetical protein | CY658_00965 | Not Available | Positive | 218013 - 218240 | 8028.71 |
| transposase | CY658_00970 | Not Available | Negative | 218488 - 219993 | 56367.1 |
| is66 family insertion sequence hypothetical protein | CY658_00980 | Not Available | Positive | 220981 - 221508 | 18895.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
