Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CY658_00815 | Not Available | Positive | 186424 - 186744 | 11257.3 |
| hypothetical protein | CY658_00820 | Not Available | Positive | 187682 - 188041 | 12632.6 |
| transporter | CY658_00825 | Not Available | Positive | 188117 - 189349 | 43774.8 |
| efflux rnd transporter periplasmic adaptor subunit | CY658_00830 | Not Available | Positive | 189346 - 190848 | 53371.2 |
| cusa/czca family heavy metal efflux rnd transporter | CY658_00835 | Not Available | Positive | 190845 - 194021 | 114125.0 |
| metal transporter | CY658_00840 | Not Available | Positive | 194018 - 194365 | 12340.3 |
| ynfa family protein | CY658_00845 | Not Available | Positive | 194436 - 194771 | 12434.4 |
| alpha/beta hydrolase | CY658_00850 | Not Available | Positive | 194853 - 195854 | 35681.7 |
| iron permease | CY658_00860 | Not Available | Positive | 196292 - 198241 | 68560.7 |
| hypothetical protein | CY658_00865 | Not Available | Positive | 198529 - 198786 | 9427.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
