Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lema family protein | CY658_00760 | Not Available | Positive | 177513 - 178112 | 20877.6 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | CY658_00765 | Not Available | Positive | 178207 - 179595 | 49718.3 |
| duf4390 domain-containing protein | CY658_00770 | Not Available | Positive | 179513 - 180217 | 26087.6 |
| pas domain-containing sensor histidine kinase | CY658_00775 | Not Available | Positive | 180214 - 182544 | 83591.8 |
| two-component system response regulator | CY658_00780 | Not Available | Positive | 182620 - 183321 | 25300.4 |
| Trna-phe | Not Available | Not Available | Positive | 183340 - 183415 | Not Available |
| dna-binding response regulator | CY658_00790 | Not Available | Negative | 183822 - 184499 | 24202.2 |
| hypothetical protein | CY658_00795 | Not Available | Negative | 184576 - 185106 | 19288.2 |
| hypothetical protein | CY658_00805 | Not Available | Positive | 185287 - 185826 | 18341.8 |
| hypothetical protein | CY658_00810 | Not Available | Negative | 185920 - 186132 | 7499.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
