Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor tu | CY658_00710 | Not Available | Positive | 163849 - 165042 | 43070.9 |
| Trna-trp | Not Available | Not Available | Positive | 165064 - 165139 | Not Available |
| preprotein translocase subunit sece | CY658_00720 | Not Available | Positive | 165241 - 165624 | 14052.2 |
| transcription termination/antitermination protein nusg | CY658_00725 | Not Available | Positive | 165624 - 166235 | 23077.5 |
| 50s ribosomal protein l11 | CY658_00730 | Not Available | Positive | 166377 - 166808 | 15045.7 |
| 50s ribosomal protein l1 | CY658_00735 | Not Available | Positive | 166809 - 167507 | 23995.3 |
| 50s ribosomal protein l10 | CY658_00740 | Not Available | Positive | 167755 - 168297 | 18582.5 |
| 50s ribosomal protein l7/l12 | CY658_00745 | Not Available | Positive | 168343 - 168714 | 12632.3 |
| dna-directed rna polymerase subunit beta | CY658_00750 | Not Available | Positive | 169016 - 173140 | 152858.0 |
| dna-directed rna polymerase subunit beta' | CY658_00755 | Not Available | Positive | 173162 - 177397 | 154996.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
