Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system-associated protein tagf | CY658_00505 | Not Available | Positive | 119806 - 120438 | 22565.0 |
| serine/threonine protein kinase | CY658_00515 | Not Available | Positive | 121133 - 123043 | 66918.9 |
| hypothetical protein | CY658_00520 | Not Available | Positive | 123103 - 124686 | 55386.7 |
| hypothetical protein | CY658_00525 | Not Available | Positive | 124717 - 125466 | 27016.1 |
| hypothetical protein | CY658_00530 | Not Available | Positive | 125494 - 126630 | 40063.6 |
| peptidase c14 | CY658_00535 | Not Available | Positive | 126627 - 128780 | 75355.1 |
| hypothetical protein | CY658_00540 | Not Available | Positive | 128838 - 129395 | 20118.7 |
| virulence protein scie type | CY658_00545 | Not Available | Positive | 129436 - 130278 | 30694.4 |
| type vi secretion system baseplate subunit tsse | CY658_00550 | Not Available | Positive | 130271 - 130786 | 19338.4 |
| type vi secretion system baseplate subunit tssf | CY658_00555 | Not Available | Positive | 130793 - 132685 | 69371.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
