Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CY658_00455 | Not Available | Negative | 104428 - 105207 | 28491.8 |
| hybrid sensor histidine kinase/response regulator | CY658_00460 | Not Available | Negative | 105214 - 107172 | 68833.9 |
| abc transporter substrate-binding protein | CY658_00465 | Not Available | Negative | 107199 - 108254 | 36121.6 |
| hybrid sensor histidine kinase/response regulator | CY658_00470 | Not Available | Negative | 108437 - 110341 | 68322.6 |
| phosphate/phosphite/phosphonate abc transporter substrate-binding protein | CY658_00475 | Not Available | Positive | 110506 - 111546 | 38177.1 |
| phosphate/phosphite/phosphonate abc transporter substrate-binding protein | CY658_00480 | Not Available | Positive | 111558 - 112571 | 36948.4 |
| hypothetical protein | CY658_00485 | Not Available | Positive | 112778 - 113212 | 15715.0 |
| type vi secretion system baseplate subunit tssk | CY658_00490 | Not Available | Positive | 113491 - 114822 | 49161.4 |
| type vi secretion system protein tssl | CY658_00495 | Not Available | Positive | 114855 - 116207 | 48012.6 |
| type vi secretion system membrane subunit tssm | CY658_00500 | Not Available | Positive | 116204 - 119809 | 132663.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
