Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase | CY658_00400 | Not Available | Negative | 85148 - 87121 | 71079.5 |
| co2+/mg2+ efflux protein apag | CY658_00405 | Not Available | Negative | 87154 - 87549 | 14176.8 |
| ribulose-phosphate 3-epimerase | CY658_00410 | Not Available | Positive | 87610 - 88305 | 24667.5 |
| succinylglutamate desuccinylase | CY658_00420 | Not Available | Positive | 88692 - 89690 | 35830.5 |
| catalase hpii | CY658_00425 | Not Available | Positive | 90036 - 92225 | 80123.0 |
| hypothetical protein | CY658_00430 | Not Available | Positive | 92377 - 94566 | 77991.3 |
| shlb/fhac/hecb family hemolysin secretion/activation protein | CY658_00435 | Not Available | Positive | 94569 - 96329 | 63007.6 |
| hemagglutinin | CY658_00440 | Not Available | Positive | 96332 - 101803 | 179511.0 |
| hypothetical protein | CY658_00445 | Not Available | Negative | 101817 - 102686 | 30955.1 |
| hypothetical protein | CY658_00450 | Not Available | Positive | 102719 - 104470 | 65706.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
