Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CY658_00300 | Not Available | Negative | 64957 - 65871 | 32736.3 |
| fmn-binding glutamate synthase family protein | CY658_00305 | Not Available | Negative | 65868 - 67568 | 60927.6 |
| zinc chelation protein secc | CY658_00310 | Not Available | Positive | 67638 - 68432 | 29814.5 |
| mfs transporter | CY658_00315 | Not Available | Positive | 68527 - 69714 | 41202.7 |
| gnat family n-acetyltransferase | CY658_00320 | Not Available | Negative | 69704 - 70024 | 11867.1 |
| ketosteroid isomerase | CY658_00325 | Not Available | Negative | 70021 - 70518 | 18390.7 |
| damage-inducible protein cina | CY658_00330 | Not Available | Negative | 70565 - 71092 | 18040.5 |
| phosphatidylglycerophosphatase a | CY658_00335 | Not Available | Negative | 71086 - 71598 | 18861.2 |
| mfs transporter | CY658_00340 | Not Available | Positive | 71803 - 73269 | 49478.2 |
| monooxygenase | CY658_00345 | Not Available | Negative | 73266 - 74954 | 62418.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
