Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine transporter | CY658_00250 | Not Available | Negative | 56418 - 57062 | 22005.4 |
| polyisoprenoid-binding protein | CY658_00255 | Not Available | Negative | 57085 - 57720 | 22804.2 |
| polyisoprenoid-binding protein | CY658_00260 | Not Available | Negative | 57759 - 58346 | 20690.0 |
| cytochrome b | CY658_00265 | Not Available | Negative | 58334 - 58981 | 23697.6 |
| hybrid sensor histidine kinase/response regulator | CY658_00270 | Not Available | Negative | 59033 - 60850 | 65137.4 |
| rna methyltransferase | CY658_00275 | Not Available | Positive | 60932 - 62185 | 45866.5 |
| qace family quaternary ammonium compound efflux smr transporter | CY658_00280 | Not Available | Negative | 62187 - 62501 | 10509.5 |
| hypothetical protein | CY658_00285 | Not Available | Negative | 62516 - 63448 | 30871.7 |
| lysr family transcriptional regulator | CY658_00290 | Not Available | Positive | 63561 - 64460 | 32688.0 |
| vapc toxin family pin domain ribonuclease | CY658_00295 | Not Available | Positive | 64515 - 64940 | 15413.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
