Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CY658_00150 | Not Available | Positive | 35299 - 35526 | 8433.0 |
| hypothetical protein | CY658_00155 | Not Available | Positive | 35519 - 36301 | 30078.1 |
| transporter | CY658_00160 | Not Available | Positive | 36367 - 36807 | 15559.6 |
| duf1016 domain-containing protein | CY658_00165 | Not Available | Positive | 36979 - 38088 | 42354.0 |
| mfs transporter | CY658_00170 | Not Available | Negative | 38119 - 39399 | 45009.9 |
| malate synthase g | CY658_00175 | Not Available | Negative | 39552 - 41735 | 78181.5 |
| histidinol-phosphate transaminase | CY658_00180 | Not Available | Positive | 42037 - 43014 | 34340.0 |
| iclr family transcriptional regulator | CY658_00185 | Not Available | Negative | 43091 - 43831 | 26529.6 |
| hydroxymethylglutaryl-coa lyase | CY658_00190 | Not Available | Positive | 43921 - 44856 | 32575.5 |
| formyl-coa transferase | CY658_00195 | Not Available | Positive | 44849 - 46039 | 42900.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
