Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. RO1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1118858 bp
Thymine Count
1123229 bp
Guanine Count
2321917 bp
Cytosine Count
2307160 bp
Genome Length
6871199 bp
Protein-coding Genes
6263 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CY658_05180 | Not Available | Negative | 1066228 - 1067064 | 30881.4 |
| hypothetical protein | CY658_05185 | Not Available | Negative | 1067186 - 1067569 | 13197.6 |
| flagellar protein flgn | CY658_05190 | Not Available | Negative | 1067626 - 1068072 | 15734.5 |
| flagellar biosynthesis anti-sigma factor flgm | CY658_05195 | Not Available | Negative | 1068078 - 1068374 | 10131.1 |
| flagellar basal body p-ring formation protein flga | CY658_05200 | Not Available | Negative | 1068471 - 1069169 | 23959.2 |
| flagellar basal body rod protein flgb | CY658_05205 | Not Available | Positive | 1069389 - 1069796 | 14878.4 |
| flagellar basal body rod protein flgc | CY658_05210 | Not Available | Positive | 1069793 - 1070188 | 13827.5 |
| flagellar biosynthesis protein flgd | CY658_05215 | Not Available | Positive | 1070233 - 1070919 | 23448.6 |
| flagellar hook protein flge | CY658_05220 | Not Available | Positive | 1070999 - 1072213 | 41367.0 |
| flagellar biosynthesis protein flgf | CY658_05225 | Not Available | Positive | 1072227 - 1072973 | 25427.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
