Chimaeribacter arupi

Gram-negativePleomorphicNon-motileFacultative Anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Chimaeribacter

Description

Chimaeribacter arupi is a Gram-negative, pleomorphic bacterium that resides in the gut of its host. This organism is classified as a chemoheterotroph, indicating that it obtains its energy from organic compounds. Chimaeribacter arupi exhibits a facultative anaerobic metabolism, allowing it to thrive in environments with varying oxygen levels. The bacterium is characterized by its single-cell arrangement and the presence of flagella, which may play a role in its mobility, although it is noted that the organism does not exhibit movement. Chimaeribacter arupi has an optimal growth temperature of 36°C and falls within the mesophilic temperature range, which suggests it is well-adapted to the warm conditions typically found in the gut. This species is nonsporulating and harbors a single replicon, which is indicative of its genomic structure. The accession number PJZK00000000.1 is associated with its genetic data, providing a reference for further research. The ecological role of Chimaeribacter arupi in the host gut may be significant, as gut bacteria often contribute to the complex microbial community that aids in digestion and nutrient absorption. By being a chemoheterotroph, it likely participates in the breakdown of organic materials, influencing the gut's microbiome dynamics. The presence of flagella, despite the lack of movement, may suggest potential interactions with other microbial species or host cells, further emphasizing its ecological importance in the gut environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusChimaeribacter
SpeciesChimaeribacter arupi
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapePleomorphic
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative Anaerobe
Optimal temperature36
Temperature rangeMesophilic
HabitatHost Gut
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementSingles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Chimaeribacter arupi strain 2016-Iso1

Gene Summary

Adenine Count

971868 bp

Thymine Count

982988 bp

Guanine Count

1381110 bp

Cytosine Count

1404690 bp

Genome Length

4740656 bp

Protein-coding Genes

4132 genes

Non-Coding Genes

130 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome o ubiquinol oxidase subunit ivCYR34_06590Not AvailablePositive1467315 - 146764712065.2
protoheme ix farnesyltransferaseCYR34_06595Not AvailablePositive1467664 - 146855132079.2
mfs transporterCYR34_06600Not AvailablePositive1468763 - 147013648951.5
yajq family cyclic di-gmp-binding proteinCYR34_06605Not AvailableNegative1470201 - 147069218432.9
2-dehydropantoate 2-reductaseCYR34_06610Not AvailablePositive1470908 - 147181933648.3
protein deglycase yajlCYR34_06615Not AvailablePositive1471782 - 147239621448.1
trna 4-thiouridine(8) synthase thiiCYR34_06620Not AvailableNegative1472466 - 147391454511.7
exodeoxyribonuclease vii small subunitCYR34_06625Not AvailablePositive1474178 - 14744269051.57
(2e,6e)-farnesyl diphosphate synthaseCYR34_06630Not AvailablePositive1474432 - 147536132770.0
1-deoxy-d-xylulose-5-phosphate synthaseCYR34_06635Not AvailablePositive1475395 - 147725767353.3

Displaying genes 1351 – 1360 of 4262 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.