Pseudochryseolinea flava str. SDU1-6

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Fulvivirgaceae

Genus

Pseudochryseolinea

Description

Pseudochryseolinea flava str. SDU1-6 is characterized by having a single replicon, which is notable for its genomic structure. The organism is cataloged under the accession number QMFY00000000.1, indicating that it has been sequenced and its genetic information is accessible for further study. As a member of the microbial community, Pseudochryseolinea flava str. SDU1-6 may play a specific role in its ecological niche, although details about its habitat or ecological interactions are not provided. The single replicon suggests a streamlined genetic organization that could influence its adaptability and metabolic efficiency in various environments. Understanding the genomic characteristics of Pseudochryseolinea flava str. SDU1-6 can contribute to broader insights into microbial diversity and function. The organism's genomic simplicity, indicated by the presence of one replicon, may allow it to thrive in specialized habitats or compete effectively for resources. Further research could elucidate its ecological role and potential applications in biotechnology or environmental management, given the importance of microbial communities in nutrient cycling and ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyFulvivirgaceae
GenusPseudochryseolinea
SpeciesPseudochryseolinea flava
StrainSDU1-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudochryseolinea flava strain SDU1-6 Scaffold48_1, whole genome

Gene Summary

Adenine Count

1856067 bp

Thymine Count

1842197 bp

Guanine Count

1423768 bp

Cytosine Count

1420714 bp

Genome Length

6542746 bp

Protein-coding Genes

5442 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDQQ10_04340Not AvailablePositive965264 - 96598027439.4
signal recognition particle-docking protein ftsyDQQ10_04345Not AvailableNegative965983 - 96693934567.8
duf4295 domain-containing proteinDQQ10_04350Not AvailableNegative967082 - 9672375610.97
50s ribosomal protein l33DQQ10_04355Not AvailableNegative967240 - 9674227004.74
50s ribosomal protein l28DQQ10_04360Not AvailableNegative967441 - 9676809019.11
had family phosphataseDQQ10_04365Not AvailableNegative967849 - 96850824668.4
hypothetical proteinDQQ10_04370Not AvailableNegative968531 - 97071481108.7
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseDQQ10_04375Not AvailablePositive970827 - 97211047283.7
duf2461 domain-containing proteinDQQ10_04380Not AvailablePositive972247 - 97290925388.3
tonb-dependent receptorDQQ10_04385Not AvailableNegative972910 - 97532191108.9

Displaying genes 881 – 890 of 5499 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.