Pseudochryseolinea flava str. SDU1-6

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Fulvivirgaceae

Genus

Pseudochryseolinea

Description

Pseudochryseolinea flava str. SDU1-6 is characterized by having a single replicon, which is notable for its genomic structure. The organism is cataloged under the accession number QMFY00000000.1, indicating that it has been sequenced and its genetic information is accessible for further study. As a member of the microbial community, Pseudochryseolinea flava str. SDU1-6 may play a specific role in its ecological niche, although details about its habitat or ecological interactions are not provided. The single replicon suggests a streamlined genetic organization that could influence its adaptability and metabolic efficiency in various environments. Understanding the genomic characteristics of Pseudochryseolinea flava str. SDU1-6 can contribute to broader insights into microbial diversity and function. The organism's genomic simplicity, indicated by the presence of one replicon, may allow it to thrive in specialized habitats or compete effectively for resources. Further research could elucidate its ecological role and potential applications in biotechnology or environmental management, given the importance of microbial communities in nutrient cycling and ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyFulvivirgaceae
GenusPseudochryseolinea
SpeciesPseudochryseolinea flava
StrainSDU1-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudochryseolinea flava strain SDU1-6 Scaffold48_1, whole genome

Gene Summary

Adenine Count

1856067 bp

Thymine Count

1842197 bp

Guanine Count

1423768 bp

Cytosine Count

1420714 bp

Genome Length

6542746 bp

Protein-coding Genes

5442 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l10DQQ10_19230Not AvailableNegative4544855 - 454539119746.9
50s ribosomal protein l1DQQ10_19235Not AvailableNegative4545403 - 454610124907.4
50s ribosomal protein l11DQQ10_19240Not AvailableNegative4546107 - 454655315840.4
transcription termination/antitermination factor nusgDQQ10_19245Not AvailableNegative4546560 - 454711720934.3
preprotein translocase subunit seceDQQ10_19250Not AvailableNegative4547129 - 45473207299.76
Trna-trpNot AvailableNot AvailablePositive4547435 - 4547510Not Available
elongation factor tuDQQ10_19260Not AvailableNegative4547745 - 454893243102.3
Trna-thrNot AvailableNot AvailablePositive4549142 - 4549213Not Available
Trna-glyNot AvailableNot AvailablePositive4549372 - 4549444Not Available
Trna-tyrNot AvailableNot AvailablePositive4549621 - 4549706Not Available

Displaying genes 3821 – 3830 of 5499 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.