Pseudochryseolinea flava str. SDU1-6

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Fulvivirgaceae

Genus

Pseudochryseolinea

Description

Pseudochryseolinea flava str. SDU1-6 is characterized by having a single replicon, which is notable for its genomic structure. The organism is cataloged under the accession number QMFY00000000.1, indicating that it has been sequenced and its genetic information is accessible for further study. As a member of the microbial community, Pseudochryseolinea flava str. SDU1-6 may play a specific role in its ecological niche, although details about its habitat or ecological interactions are not provided. The single replicon suggests a streamlined genetic organization that could influence its adaptability and metabolic efficiency in various environments. Understanding the genomic characteristics of Pseudochryseolinea flava str. SDU1-6 can contribute to broader insights into microbial diversity and function. The organism's genomic simplicity, indicated by the presence of one replicon, may allow it to thrive in specialized habitats or compete effectively for resources. Further research could elucidate its ecological role and potential applications in biotechnology or environmental management, given the importance of microbial communities in nutrient cycling and ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyFulvivirgaceae
GenusPseudochryseolinea
SpeciesPseudochryseolinea flava
StrainSDU1-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudochryseolinea flava strain SDU1-6 Scaffold48_1, whole genome

Gene Summary

Adenine Count

1856067 bp

Thymine Count

1842197 bp

Guanine Count

1423768 bp

Cytosine Count

1420714 bp

Genome Length

6542746 bp

Protein-coding Genes

5442 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sigma-70 family rna polymerase sigma factorDQQ10_11485Not AvailablePositive2674713 - 267526120910.3
hypothetical proteinDQQ10_11490Not AvailablePositive2675284 - 26755118807.67
atp-dependent clp protease proteolytic subunitDQQ10_11495Not AvailablePositive2675517 - 267618824397.4
hypothetical proteinDQQ10_11500Not AvailableNegative2676192 - 267683323742.4
ribose 5-phosphate isomerase aDQQ10_11505Not AvailablePositive2677009 - 267768023804.8
4,5-dopa dioxygenase extradiolDQQ10_11510Not AvailableNegative2677699 - 267852930909.2
hypothetical proteinDQQ10_11515Not AvailablePositive2678876 - 267941219904.0
hypothetical proteinDQQ10_11520Not AvailablePositive2679487 - 267984913869.3
hypothetical proteinDQQ10_11525Not AvailablePositive2679846 - 268073033602.0
2-isopropylmalate synthaseDQQ10_11530Not AvailablePositive2680872 - 268239556391.4

Displaying genes 2291 – 2300 of 5499 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.