Shewanella sp. Pdp11

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella sp. Pdp11 is a notable member of the Shewanella genus, characterized by the presence of flagella, which suggests motility and potential adaptability to various environments. This trait may enable the organism to navigate through different aquatic habitats, enhancing its ecological niche. The genomic information of Shewanella sp. Pdp11 is represented by a single replicon, indicating a streamlined genetic structure. The accession number for its genetic sequence is NZ_CP015194.1, which provides a basis for further genomic studies and comparisons with other Shewanella species. Understanding the traits of Shewanella sp. Pdp11 not only contributes to the taxonomy and classification of this bacterium but also offers insights into its ecological roles. The presence of flagella may facilitate interactions with other microorganisms and influence its survival strategies in diverse environments. Overall, the characteristics of Shewanella sp. Pdp11 highlight its potential significance in microbial ecology and biotechnological applications, particularly in bioremediation and bioenergy production.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella sp. Pdp11
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Shewanella sp. Pdp11 chromosome, complete genome.

Gene Summary

Adenine Count

1337415 bp

Thymine Count

1336186 bp

Guanine Count

1147359 bp

Cytosine Count

1152737 bp

Genome Length

4973697 bp

Protein-coding Genes

4128 genes

Non-Coding Genes

183 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
molecular chaperoneAYJ58_RS04040Not AvailableNegative884871 - 88554825161.9
4fe-4s binding proteinAYJ58_RS04045Not AvailableNegative885559 - 88722060422.6
duf3306 domain-containing proteinAYJ58_RS04050Not AvailableNegative887410 - 88806023335.7
duf3305 domain-containing proteinAYJ58_RS04055Not AvailableNegative888060 - 88852417368.6
formate dehydrogenase accessory sulfurtransferase fdhdAYJ58_RS04060Not AvailablePositive888844 - 88971031497.8
helix-turn-helix transcriptional regulatorAYJ58_RS04065Not AvailablePositive889780 - 89068533930.1
16s ribosomal rnaNot AvailableNot AvailablePositive891480 - 893022Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive893389 - 896291Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive896521 - 896636Not Available
cina family nicotinamide mononucleotide deamidase-related proteinAYJ58_RS04085Not AvailablePositive896949 - 89822346076.7

Displaying genes 851 – 860 of 4311 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.