Psychrobacter sp. Sarcosine-02u-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Psychrobacter

Description

Psychrobacter sp. Sarcosine-02u-2 is a bacterium characterized by the presence of flagella, which suggests its capability for motility. It has a complex genomic structure, consisting of seven replicons, indicating a potentially diverse genetic repertoire that may contribute to its adaptability in various environments. The strain is documented in several GenBank accession numbers, including NZ_CM009137.1, PJBX00000000.1, NZ_CM009136.1, NZ_CM009138.1, NZ_CM009139.1, NZ_CM009140.1, and NZ_CM009141.1. This extensive genomic information allows for a comprehensive analysis of its genetic makeup, which is essential for understanding its physiological and ecological roles. Psychrobacter species are often associated with cold environments and have been studied for their psychrophilic properties, although specific temperature range data for this strain is not provided. The presence of flagella may play a significant role in its survival and colonization in these niches, allowing for movement toward nutrient sources or away from harmful conditions. In an ecological context, the adaptability of Psychrobacter sp. Sarcosine-02u-2, as indicated by its genomic diversity and motility, suggests it may play an important role in nutrient cycling in cold environments. This adaptability could position it as a crucial player in microbial communities where temperature fluctuations and nutrient availability are critical factors in ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusPsychrobacter
SpeciesPsychrobacter sp. Sarcosine-02u-2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Psychrobacter sp. Sarcosine-02u-2 plasmid unnamed3, whole genome

Gene Summary

Adenine Count

2139 bp

Thymine Count

2375 bp

Guanine Count

1489 bp

Cytosine Count

1479 bp

Genome Length

7482 bp

Protein-coding Genes

8 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf3360 domain-containing proteinCXF58_00125Not AvailablePositive23377 - 2490054495.6
excinuclease abc subunit uvrcCXF58_00130Not AvailablePositive25087 - 2693168972.5
dihydrofolate reductaseCXF58_00135Not AvailableNegative27042 - 2761421333.1
thymidylate synthaseCXF58_00140Not AvailableNegative27650 - 2795811421.8
hypothetical proteinCXF58_00145Not AvailableNegative28144 - 283206470.03
heme lyase nrfefg subunit nrfeCXF58_00150Not AvailablePositive28417 - 2951840051.7
dsbe family thiol:disulfide interchange proteinCXF58_00155Not AvailablePositive29602 - 3018021515.1
cytochrome c biogenesis proteinCXF58_00160Not AvailablePositive30177 - 3074621629.1
c-type cytochrome biogenesis protein ccmiCXF58_00165Not AvailablePositive30743 - 3202347099.8
is1595 family transposaseCXF58_00170Not AvailableNegative32051 - 3270124986.9

Displaying genes 71 – 80 of 166 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.