Psychrobacter sp. Sarcosine-02u-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Psychrobacter

Description

Psychrobacter sp. Sarcosine-02u-2 is a bacterium characterized by the presence of flagella, which suggests its capability for motility. It has a complex genomic structure, consisting of seven replicons, indicating a potentially diverse genetic repertoire that may contribute to its adaptability in various environments. The strain is documented in several GenBank accession numbers, including NZ_CM009137.1, PJBX00000000.1, NZ_CM009136.1, NZ_CM009138.1, NZ_CM009139.1, NZ_CM009140.1, and NZ_CM009141.1. This extensive genomic information allows for a comprehensive analysis of its genetic makeup, which is essential for understanding its physiological and ecological roles. Psychrobacter species are often associated with cold environments and have been studied for their psychrophilic properties, although specific temperature range data for this strain is not provided. The presence of flagella may play a significant role in its survival and colonization in these niches, allowing for movement toward nutrient sources or away from harmful conditions. In an ecological context, the adaptability of Psychrobacter sp. Sarcosine-02u-2, as indicated by its genomic diversity and motility, suggests it may play an important role in nutrient cycling in cold environments. This adaptability could position it as a crucial player in microbial communities where temperature fluctuations and nutrient availability are critical factors in ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusPsychrobacter
SpeciesPsychrobacter sp. Sarcosine-02u-2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Psychrobacter sp. Sarcosine-02u-2 plasmid unnamed3, whole genome

Gene Summary

Adenine Count

2139 bp

Thymine Count

2375 bp

Guanine Count

1489 bp

Cytosine Count

1479 bp

Genome Length

7482 bp

Protein-coding Genes

8 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCXF58_00080Not AvailablePositive17168 - 174169485.89
4-hydroxybenzoate octaprenyltransferaseCXF58_00085Not AvailablePositive17502 - 1841933653.9
duf4112 domain-containing proteinCXF58_00090Not AvailablePositive18412 - 1908925051.9
is1 transposaseCXF58_00095Not AvailablePositive19157 - 192925446.67
30s ribosomal protein s16CXF58_00100Not AvailablePositive19675 - 199449874.76
ribosome maturation factor rimmCXF58_00105Not AvailablePositive20157 - 2069020155.8
trna (guanosine(37)-n1)-methyltransferase trmdCXF58_00110Not AvailablePositive20753 - 2151728671.4
50s ribosomal protein l19CXF58_00115Not AvailablePositive21723 - 2214515438.8
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive22620 - 22986Not Available
duf4442 domain-containing proteinCXF58_00120Not AvailableNegative22394 - 2295120929.8

Displaying genes 61 – 70 of 166 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.