Psychrobacter sp. Sarcosine-02u-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Psychrobacter

Description

Psychrobacter sp. Sarcosine-02u-2 is a bacterium characterized by the presence of flagella, which suggests its capability for motility. It has a complex genomic structure, consisting of seven replicons, indicating a potentially diverse genetic repertoire that may contribute to its adaptability in various environments. The strain is documented in several GenBank accession numbers, including NZ_CM009137.1, PJBX00000000.1, NZ_CM009136.1, NZ_CM009138.1, NZ_CM009139.1, NZ_CM009140.1, and NZ_CM009141.1. This extensive genomic information allows for a comprehensive analysis of its genetic makeup, which is essential for understanding its physiological and ecological roles. Psychrobacter species are often associated with cold environments and have been studied for their psychrophilic properties, although specific temperature range data for this strain is not provided. The presence of flagella may play a significant role in its survival and colonization in these niches, allowing for movement toward nutrient sources or away from harmful conditions. In an ecological context, the adaptability of Psychrobacter sp. Sarcosine-02u-2, as indicated by its genomic diversity and motility, suggests it may play an important role in nutrient cycling in cold environments. This adaptability could position it as a crucial player in microbial communities where temperature fluctuations and nutrient availability are critical factors in ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusPsychrobacter
SpeciesPsychrobacter sp. Sarcosine-02u-2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Psychrobacter sp. Sarcosine-02u-2 plasmid unnamed3, whole genome

Gene Summary

Adenine Count

2139 bp

Thymine Count

2375 bp

Guanine Count

1489 bp

Cytosine Count

1479 bp

Genome Length

7482 bp

Protein-coding Genes

8 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimeraseCXF58_00035Not AvailableNegative6487 - 826863883.9
Ncrna_class:otherNot AvailableNot AvailablePositive8346 - 8541Not Available
trna epoxyqueuosine(34) reductase quegCXF58_00040Not AvailablePositive8463 - 971946870.8
is1 transposaseCXF58_00045Not AvailablePositive9807 - 99274897.06
formyltetrahydrofolate deformylaseCXF58_00050Not AvailablePositive10429 - 1132533571.4
cytochrome c assembly proteinCXF58_00055Not AvailableNegative11438 - 1224429958.3
signal recognition particle proteinCXF58_00060Not AvailablePositive12663 - 1420455906.3
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsabCXF58_00065Not AvailablePositive14439 - 1512224808.7
undecaprenyl-diphosphate phosphataseCXF58_00070Not AvailablePositive15235 - 1607730506.6
16s rrna methyltransferaseCXF58_00075Not AvailablePositive16160 - 1706233402.9

Displaying genes 51 – 60 of 166 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.