Psychrobacter sp. Sarcosine-02u-2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Psychrobacter

Description

Psychrobacter sp. Sarcosine-02u-2 is a bacterium characterized by the presence of flagella, which suggests its capability for motility. It has a complex genomic structure, consisting of seven replicons, indicating a potentially diverse genetic repertoire that may contribute to its adaptability in various environments. The strain is documented in several GenBank accession numbers, including NZ_CM009137.1, PJBX00000000.1, NZ_CM009136.1, NZ_CM009138.1, NZ_CM009139.1, NZ_CM009140.1, and NZ_CM009141.1. This extensive genomic information allows for a comprehensive analysis of its genetic makeup, which is essential for understanding its physiological and ecological roles. Psychrobacter species are often associated with cold environments and have been studied for their psychrophilic properties, although specific temperature range data for this strain is not provided. The presence of flagella may play a significant role in its survival and colonization in these niches, allowing for movement toward nutrient sources or away from harmful conditions. In an ecological context, the adaptability of Psychrobacter sp. Sarcosine-02u-2, as indicated by its genomic diversity and motility, suggests it may play an important role in nutrient cycling in cold environments. This adaptability could position it as a crucial player in microbial communities where temperature fluctuations and nutrient availability are critical factors in ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusPsychrobacter
SpeciesPsychrobacter sp. Sarcosine-02u-2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Psychrobacter sp. Sarcosine-02u-2 plasmid unnamed3, whole genome

Gene Summary

Adenine Count

2139 bp

Thymine Count

2375 bp

Guanine Count

1489 bp

Cytosine Count

1479 bp

Genome Length

7482 bp

Protein-coding Genes

8 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

7

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleotidyl transferase abieii/abigii toxin family proteinCXF58_RS00085Not AvailablePositive2424 - 331134296.1
atp-binding proteinCXF58_RS00090Not AvailableNegative3381 - 527672615.6
mobilization protein mobsCXF58_RS00095Not AvailableNegative5379 - 569011808.2
moba/mobl family proteinCXF58_RS00100Not AvailablePositive5946 - 760462212.9
hypothetical proteinCXF58_RS00105Not AvailablePositive7608 - 840829402.9
dna methyltransferaseCXF58_RS00005Not AvailableNegative60 - 2855106518.0
hypothetical proteinCXF58_RS00010Not AvailableNegative2931 - 328714452.0
replication initiation protein repmCXF58_RS00015Not AvailableNegative3284 - 427338034.7
plasmid replication dna-binding proteinCXF58_RS00020Not AvailablePositive4927 - 543919633.2
duf2326 domain-containing proteinCXF58_RS00025Not AvailableNegative5493 - 728368870.0

Displaying genes 11 – 20 of 166 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.