Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sp. GutDb-MelDb |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella sp. GutDb-MelDb contig4, whole genome shotgun sequence.
Gene Summary
Adenine Count
1411132 bp
Thymine Count
1410472 bp
Guanine Count
1083528 bp
Cytosine Count
1089600 bp
Genome Length
4994732 bp
Protein-coding Genes
1058 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxygen-dependent coproporphyrinogen oxidase | CXF82_03345 | Not Available | Negative | 704299 - 705213 | 34352.2 |
| threonylcarbamoyl-amp synthase | CXF82_03350 | Not Available | Negative | 705226 - 705789 | 19953.2 |
| hypothetical protein | CXF82_03355 | Not Available | Negative | 705882 - 706445 | 20918.8 |
| collagenase | CXF82_03360 | Not Available | Positive | 706569 - 708341 | 66942.9 |
| hypothetical protein | CXF82_03365 | Not Available | Negative | 708410 - 708883 | 18463.0 |
| dna-protecting protein dpra | CXF82_03370 | Not Available | Negative | 708886 - 709905 | 36618.1 |
| peptidoglycan-binding protein lysm | CXF82_03375 | Not Available | Negative | 710051 - 711151 | 40141.7 |
| peptide deformylase | CXF82_03380 | Not Available | Positive | 711287 - 711799 | 19308.2 |
| methionyl-trna formyltransferase | CXF82_03385 | Not Available | Positive | 711804 - 712769 | 34731.6 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase | CXF82_03390 | Not Available | Positive | 712775 - 714055 | 47500.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

