Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella sp. GutDb-MelDb |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella sp. GutDb-MelDb contig4, whole genome shotgun sequence.
Gene Summary
Adenine Count
1411132 bp
Thymine Count
1410472 bp
Guanine Count
1083528 bp
Cytosine Count
1089600 bp
Genome Length
4994732 bp
Protein-coding Genes
1058 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c | CXF82_02225 | Not Available | Positive | 471557 - 472147 | 22263.6 |
| tigr02808 family protein | CXF82_02230 | Not Available | Positive | 472157 - 472285 | 4518.65 |
| d-alanine--d-alanine ligase | CXF82_02235 | Not Available | Negative | 472776 - 473777 | 36984.7 |
| exodeoxyribonuclease v subunit alpha | CXF82_02240 | Not Available | Negative | 473985 - 475982 | 73242.0 |
| exodeoxyribonuclease v subunit beta | CXF82_02245 | Not Available | Negative | 475982 - 479674 | 138184.0 |
| exodeoxyribonuclease v subunit gamma | CXF82_02250 | Not Available | Negative | 479676 - 483353 | 137825.0 |
| duf3488 domain-containing protein | CXF82_02255 | Not Available | Negative | 483413 - 483646 | 9078.21 |
| atp-binding protein | CXF82_02260 | Not Available | Negative | 483647 - 485051 | 52304.2 |
| sam-dependent methyltransferase | CXF82_02265 | Not Available | Negative | 485041 - 486732 | 64061.8 |
| two-component system response regulator ompr | CXF82_02275 | Not Available | Positive | 487913 - 488638 | 27358.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

