Arenimonas caeni str. z29

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Arenimonas

Description

Arenimonas caeni str. z29 is a Gram-negative bacterium characterized by its rod shape. This species is notable for having a single replicon, indicating a streamlined genomic organization that is often associated with efficient replication and adaptation processes. The genomic sequence of Arenimonas caeni str. z29 is documented under the accession number PVLF00000000.1, allowing for further exploration of its genetic makeup. The Gram-negative classification of Arenimonas caeni str. z29 suggests that it possesses a thin peptidoglycan layer surrounded by an outer membrane, which is a common feature of this group of bacteria. This structural characteristic can influence the organism's interactions with its environment, including responses to antibiotics and environmental stressors. In an ecological context, the rod shape of Arenimonas caeni str. z29 may confer advantages in motility and nutrient acquisition in various environments. Such morphological traits often facilitate efficient movement through aquatic habitats or soil, potentially enabling the organism to occupy niches where nutrient cycling occurs. Given the limited information available, it is essential to recognize that further research could elucidate the specific ecological roles and interactions of Arenimonas caeni str. z29 within its ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusArenimonas
SpeciesArenimonas caeni
Strainz29

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Arenimonas caeni strain z29 contig53, whole genome shotgun

Gene Summary

Adenine Count

440887 bp

Thymine Count

439644 bp

Guanine Count

1035676 bp

Cytosine Count

1038081 bp

Genome Length

2954288 bp

Protein-coding Genes

2663 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcription antitermination factor nusbC6N40_02445Not AvailableNegative510220 - 51068117368.5
6,7-dimethyl-8-ribityllumazine synthaseC6N40_02450Not AvailableNegative510678 - 51114516151.2
3,4-dihydroxy-2-butanone-4-phosphate synthaseC6N40_02455Not AvailableNegative511271 - 51235339378.2
riboflavin synthaseC6N40_02460Not AvailableNegative512350 - 51295521417.3
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribdC6N40_02465Not AvailableNegative513046 - 51413437934.9
gnat family n-acetyltransferaseC6N40_02470Not AvailableNegative514131 - 51461017122.3
transcriptional regulator nrdrC6N40_02475Not AvailableNegative514607 - 51512219663.5
serine hydroxymethyltransferaseC6N40_02480Not AvailableNegative515133 - 51638344708.4
energy-dependent translational throttle protein ettaC6N40_02485Not AvailablePositive516646 - 51831062040.9
glycosyltransferase family 2 proteinC6N40_02490Not AvailableNegative518409 - 51932933417.1

Displaying genes 521 – 530 of 2739 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.