Arenimonas caeni str. z29

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Arenimonas

Description

Arenimonas caeni str. z29 is a Gram-negative bacterium characterized by its rod shape. This species is notable for having a single replicon, indicating a streamlined genomic organization that is often associated with efficient replication and adaptation processes. The genomic sequence of Arenimonas caeni str. z29 is documented under the accession number PVLF00000000.1, allowing for further exploration of its genetic makeup. The Gram-negative classification of Arenimonas caeni str. z29 suggests that it possesses a thin peptidoglycan layer surrounded by an outer membrane, which is a common feature of this group of bacteria. This structural characteristic can influence the organism's interactions with its environment, including responses to antibiotics and environmental stressors. In an ecological context, the rod shape of Arenimonas caeni str. z29 may confer advantages in motility and nutrient acquisition in various environments. Such morphological traits often facilitate efficient movement through aquatic habitats or soil, potentially enabling the organism to occupy niches where nutrient cycling occurs. Given the limited information available, it is essential to recognize that further research could elucidate the specific ecological roles and interactions of Arenimonas caeni str. z29 within its ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusArenimonas
SpeciesArenimonas caeni
Strainz29

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Arenimonas caeni strain z29 contig53, whole genome shotgun

Gene Summary

Adenine Count

440887 bp

Thymine Count

439644 bp

Guanine Count

1035676 bp

Cytosine Count

1038081 bp

Genome Length

2954288 bp

Protein-coding Genes

2663 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
deoxyribodipyrimidine photolyaseC6N40_02190Not AvailableNegative452567 - 45409657491.6
atp-dependent chaperone clpbC6N40_02195Not AvailableNegative454208 - 45679094924.1
hypothetical proteinC6N40_02200Not AvailableNegative456877 - 45783034702.5
peptidoglycan editing factor pgefC6N40_02205Not AvailableNegative457900 - 45867026498.5
23s rrna pseudouridine(1911/1915/1917) synthase rludC6N40_02210Not AvailableNegative458674 - 45966936547.1
outer membrane protein assembly factor bamdC6N40_02215Not AvailablePositive459783 - 46062231811.7
nad+ synthaseC6N40_02220Not AvailableNegative460669 - 46229759092.2
succinate--coa ligase subunit alphaC6N40_02225Not AvailableNegative462367 - 46324229542.8
adp-forming succinate--coa ligase subunit betaC6N40_02230Not AvailableNegative463263 - 46442641233.9
pas domain-containing sensor histidine kinaseC6N40_02235Not AvailablePositive464541 - 46617558669.4

Displaying genes 471 – 480 of 2739 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.